Contents

Crystallography Reports


Vol. 68, No. 6, 2023


Editor-in-Chief’s Column

p. 841  abstract

Reviews

Structural Basis for Interactions between Influenza A Virus M2 Proton Channel and Adamantane-Based Antiviral Drugs

A. A. Lashkov, T. M. Garaev, S. V. Rubinsky and V. R. Samygina p. 843  abstract


Structure of Macromolecular Compounds

Preliminary X-ray Study of Crystals Obtained by Co-Crystallization of Hypoxanthine‒Guanine Phosphoribosyltransferase from Escherichia coli and Pyrazine-2-Carboxamide Derivatives

Y. A. Abramchik, E. A. Zayats, V. I. Timofeev, M. B. Shevtsov, M. A. Kostromina, I. V. Fateev, D. O. Yurovskaya, A. A. Karanov, I. D. Konstantinova, I. P. Kuranova and R. S. Esipov p. 852  abstract

Effect of Reversion Back to Cys11 on the Structure and Function of S11C Cys-free Nt.BspD6I

R. I. Artyukh, B. F. Fatkhullin, V. N. Antipova, T. A. Perevyazova, G. S. Kachalova and A. K. Yunusova p. 857  abstract

Preparation and Crystallographic Analysis of a Complex of SARS-CoV-2 S-Protein Receptor-Binding Domain with a Virus-Neutralizing Nanoantibody

K. M. Boyko, L. A. Varfolomeeva, N. A. Egorkin, M. E. Minyaev, I. A. Alekseeva, I. A. Favorskaya, E. I. Ryabova, V. V. Prokofiev, I. B. Esmagambetov, D. B. Shcheblyakov, D. Yu. Logunov, A. L. Gintsburg, V. O. Popov and N. N. Sluchanko p. 864  abstract

Electron Microscopy Study of the Structure of the Sup35 Prion from Yeast Saccharomyces cerevisiae

A. D. Burtseva, A. V. Moiseenko, T. N. Baymukhametov, A. A. Dergalev, K. M. Boyko and V. V. Kushnirov p. 872  abstract

Structural Study of the Light-Harvesting Complex LH2 from the Purple Sulfur Bacteria Ectothiorhodospira haloalkaliphila by Cryoelectronic Microscopy

A. D. Burtseva, T. N. Baymukhametov, I. O. Ilyasov, M. A. Bolshakov, A. A. Moskalenko, K. M. Boyko and A. A. Ashikhmin p. 879  abstract

Improvement of the Diffraction Properties of Thiocyanate Dehydrogenase Crystals

L. A. Varfolomeeva, K. M. Polyakov, A. S. Komolov, T. V. Rakitina, N. I. Dergousova, P. V. Dorovatovskii, K. M. Boyko, T. V. Tikhonova and V. O. Popov p. 886  abstract

Ab Initio Shape of Supramolecular Complexes of Cucurbit[8]uril in Solution Found from Small-Angle X-ray Scattering Data

V. V. Volkov, V. A. Livshits, B. B. Meshkov and V. E. Asadchikov p. 892  abstract

Effect of Microgravity on the Crystallization of Cardiotoxin from the Venom of Spectacled Cobra Naja naja

K. M. Dubova, P. V. Dubovskii, Y. N. Utkin and V. R. Samygina p. 900  abstract

The Structure of the Hfq Protein from Chromobacterium haemolyticum Revealed a New Variant of Regulation of RNA Binding with the Protein

N. V. Lekontseva and A. D. Nikulin p. 905  abstract

Comparative Structural Investigation of Histone-Like HU Proteins by Small-Angle X-ray Scattering

M. V. Petoukhov, T. V. Rakitina, Yu. K. Agapova, D. E. Petrenko, P. V. Konarev, V. V. Britikov, E. V. Britikova, E. V. Bocharov and E. V. Shtykova p. 912  abstract

Preliminary X-ray Diffraction Analysis of Purine Nucleoside Phosphorylase from the Haloalkaliphilic Bacterium Halomonas chromatireducens

T. N. Safonova, A. N. Antipov, V. P. Veiko, N. N. Mordkovich, N. A. Okorokova, P. V. Dorovatovskii and K. M. Polyakov p. 920  abstract

Preparation and Crystallization of Picornain 3C of Rhinovirus A28

A. E. Tishin, A. V. Gladysheva, L. A. Pyatavina, S. E. Olkin, A. A. Gladysheva, I. R. Imatdionov, A. V. Vlaskina, A. Yu. Nikolaeva, V. R. Samygina and A. P. Agafonov p. 924  abstract

3D Structure of D-Аmino Acid Тransaminase from Aminobacterium colombiense in Complex with D-Cycloserine

S. A. Shilova, I. O. Matyuta, E. Y. Bezsudnova, M. E. Minyaev, A. Y. Nikolaeva, V. O. Popov and K. M. Boyko p. 931  abstract


Diffraction and Scattering of Ionizing Radiations

Determination of the Shape of a Helix Particle Based on Small-Angle X-ray Scattering Data: Modification of the “Simulated Annealing” Algorithm

V. A. Grigorev, P. V. Konarev and V. V. Volkov p. 938  abstract

Decomposition of Small-Angle Scattering Profiles from Two Conformational States of 3-Isopropylmalate Dehydrogenase Using Evolving Factor Analysis

P. V. Konarev and V. V. Volkov p. 943  abstract


Crystallography in Biology and Medicine

Study of the Precrystallization Solution of Lysozyme by Accelerated Molecular Dynamics Simulation

A. S. Ivanovsky, I. Garipov, Yu. V. Kordonskaya, V. I. Timofeev, M. A. Marchenkova, Yu. V. Pisarevsky, Yu. A. Dyakova and M. V. Kovalchuk p. 947  abstract

Application of the Crystal Structure of the SARS-CoV-2 Spike Protein for the Development of a Peptide Vaccine against Virus

A. S. Ivanovsky, I. A. Kolesnikov, Yu. V. Kordonskaya, A. V. Ermakov, M. A. Marchenkova, V. I. Timofeev, Yu. V. Pisarevsky, Yu. A. Dyakova and M. V. Kovalchuk p. 951  abstract

Search for New Potential T-Cell and B-Cell Epitopes in the Spike Protein of SARS-CoV-2

I. A. Kolesnikov, V. I. Timofeev, M. V. Nikolenko, A. V. Ermakov, A. S. Ivanovsky, Yu. A. Dyakova, Yu. V. Pisarevsky and M. V. Kovalchuk p. 955  abstract

Search for Potential Epitopes in the Envelope Protein of the African Swine Fever Virus

I. A. Kolesnikov, V. I. Timofeev, A. V. Ermakov, A. S. Ivanovsky, Yu. A. Dyakova, Yu. V. Pisarevsky and M. V. Kovalchuk p. 967  abstract

Application of Protein Crystallography and Machine Learning Data for the Development of a Peptide Vaccine against African Swine Fever

A. S. Ivanovsky, I. A. Kolesnikov, Yu. V. Kordonskaya, A. V. Ermakov, M. A. Marchenkova, V. I. Timofeev, Yu. V. Pisarevsky, Yu. A. Dyakova and M. V. Kovalchuk p. 975  abstract

Effect of Plasma Treatment of Biomedical Scaffolds on Neuronal Cell Adhesion

A. M. Azieva, E. V. Yastremsky, D. A. Kirillova, T. D. Patsaev, A. A. Mikhutkin, R. V. Sharikov, R. A. Kamyshinsky, K. I. Lukanina, N. A. Sharikova, T. E. Grigoriev and A. L. Vasiliev p. 979  abstract


Surface and Thin Films

Structural Reorganization of Cell Membrane Models Caused by the Anticancer Antibiotic Doxorubicin

N. N. Novikova, M. V. Kovalchuk, A. V. Rogachev, Yu. N. Malakhova, J. O. Kotova, S. E. Gelperina and S. N. Yakunin p. 986  abstract


Nanomaterials

Mineralization of Shells of Emulsion Polyelectrolyte Microcapsules by Calcium Carbonate

A. V. Buslenko, T. V. Bukreeva, A. P. Chistyakov, M. A. Vantsian, D. B. Trushina, E. D. Nikolskaya, M. R. Mollaeva, N. G. Yabbarov and M. B. Sokol p. 997  abstract