70 Subunit Structure Dependence in Escherichia coli RNA Polymerase on Ionic Strength by the Molecular Dynamics Simulation Method
Contents
Biophysics
Vol. 60, No. 6, 2015
A simultaneous English language translation of this journal is available from Pleiades Publishing, Inc.
Distributed worldwide by Springer. Biophysics ISSN 0006-3509.
Molecular Biophysics
Investigation of 70 Subunit Structure Dependence in Escherichia coli RNA Polymerase
on Ionic Strength by the Molecular Dynamics Simulation Method
A. P. Tolstova, E. V. Dubrovin, and O. N. Koroleva p. 865 abstract
Evaluation of Hexokinase Gene Expression in Colorectal Cancer Using Bioinformatics Tools
G. S. Krasnov, A. A. Dmitriev, A. F. Sadritdinova, M. S. Fedorova, A. V. Snezhkina,
N. V. Melnikova, A. V. Poteryakhina, K. M. Nyushko, M. M. Belyakov, A. D. Kaprin,
A. R. Zaretsky, and A. V. Kudryavtseva p. 870 abstract
Developing a Mathematical Method to Search for Latent Periodicity in Protein Amino-Acid
Sequences with Deletions and Insertions
E. V. Korotkov and M. A. Korotkova p. 876 abstract
Prediction of Protein Conformational Mobility with Validation Using Small-Angle X-Ray Scattering
S. N. Knyazev, V. Yu. Kalyakin, I. N. Deryabin, B. A. Fedorov, A. V. Smirnov,
E. O. Stepanov, and Yu. B. Porozov p. 886 abstract
Assessment of the DNA-Binding Properties of Actinomycin and Its Derivatives
by Molecular Dynamics Simulation
O. I. Volokh, M. E. Bozdaganyan, and K. V. Shaitan p. 893 abstract
The Comparative Efficiency of Algorithms for the Construction of Support-Vector Machines
for Regression Reconstruction Tasks
N. O. Kadyrova and L. V. Pavlova p. 900 abstract
The Effect of a Low-Frequency Electromagnetic Field on DNA Molecules in Aqueous Solutions
E. E. Tekutskaya, M. G. Barishev, and G. P. Ilchenko p. 913 abstract
Cell Biophysics
The Effects of Near Infrared Radiation on Rats Assessed by Succinate Dehydrogenase Activity
in Lymphocytes in Blood Smears
N. V. Khunderyakova, A. V. Zakharchenko, M. V. Zakharchenko, H. Muller,
N. I. Fedotcheva, and M. N. Kondrashova p. 917 abstract
Protomitohondria from Liver Cells: Similarities with and Differences from Mitochondria
E. A. Begunova and N. L. Vekshin p. 921 abstract
The Effects of Phenolic Microbial Metabolites on the Activities of Mitochondrial Enzymes
N. I. Fedotcheva, E. G. Litvinova, A. A. Osipov, A. Yu. Olenin,
V. V. Moroz, and N. V. Beloborodova p. 928 abstract
Degradation of Mitochondria to Lipofuscin upon Heating and Illumination
M. S. Frolova, A. M. Surin, A. V. Braslavski, and N. L. Vekshin p. 934 abstract
A Biophysical Model of the Contractile Activity of Muscle Cells
A. S. Pokusaev and I. V. Ogneva p. 940 abstract
The Interaction of the Membrane and Calcium Oscillators in Cardiac Pacemaker Cells:
Mathematical Modeling
A. M. Ryvkin, N. M. Zorin, A. S. Moskvin, O. E. Solovyova, and V. S. Markhasin p. 946 abstract
The Inhibition of NF-kB Activation Decreases the Resistance of Acute Myeloid Leukemia Cells
to TRAIL-Induced Apoptosis in Multicellular Aggregates
R. S. Fadeev, M. E. Solovieva, D. A. Slyadovskiy, S. G. Zakharov, I. S. Fadeeva,
A. S. Senotov, A. K. Golenkov, and V. S. Akatov p. 953 abstract
The Cytoprotective Effect of the Phytoestrogen Genistein on Tumor Cells
T. A. Fedotcheva, K. E. Shirokikh, A. I. Matyushin, V. M. Rzheznikov,
V. Yu. Kovtun, and N. L. Shimanovskii p. 957 abstract
Biophysics of Complex Systems
The Antitumor Activity of the S-Nitrosoglutathione and Dinitrosyl Iron Complex
with Glutathione: Comparative Studies
A. F. Vanin, L. A. Ostrovskaya, D. B. Korman, L. N. Kubrina, R. R. Borodulin,
M. M. Fomina, N. V. Bluchterova, V. A. Rykova, and A. A. Timoshin p. 963 abstract
The Effect of Changes in CYP2E1 Activity in the Liver on Toxicity and Carcinogenicity
of Diethylnitrosamine in Mice
V. I. Kaledin, S. I. Ilnitskaya, E. A. Vasyunina, N. A. Popova, L. A. Bogdanova,
M. L. Perepechaeva, and A. Y. Grishanova p. 970 abstract
Mathematical Modeling of the Stretching-Induced Elongation of the Embryonic
Epithelium Layer in the Absence of an External Load
S. A. Logvenkov and A. A. Stein p. 977 abstract
Mathematical Modelling of the Dependence of the Performance of the Left Ventrical
of the Heart on Preload and Afterload
F. A. Syomin, M. V. Zberia, N. A. Koubassova, and A. K. Tsaturyan p. 983 abstract
The Persistence of Blood-Flow Oscillations in the Rat Kidney
L. V. Mezentseva, S. S. Pertsov, and V. K. Hugaeva p. 988 abstract
On Two Opposing (Bio)Surfaces as Comprehended in Terms of an Extension
of the Coulomb
Amontons
Law of Friction with Its Virtual Usefulness
for Biotribology at the Nanoscale
A. Gadomski and J. Hladyszowski p. 992 abstract
Approaches to Laser Speckle Reduction for Uniform Illumination of the Field
of View of a Microscope during Biophysical Studies
V. E. Barsky, Yu. P. Lysov, E. E. Yegorov, D. A. Yurasov, D. D. Mamaev, R. A. Yurasov,
A. V. Cherepanov, A. V. Chudinov, O. V. Smoldovskaya, A. S. Arefieva,
A. Yu. Rubina, and A. S. Zasedatelev p. 997 abstract
Discussions
The Search for Decisive Factors in a Study of the Ultimate Cause of Cluster Structure
Formation in Water
I. N. Govor and A. A. Dipner p. 1002 abstract
Period Tripling in Multiscale Physical and Biological Events
A. T. Bondar, M. V. Fedorov, and V. A. Kolombet p. 1006 abstract
Letters to the Editor
The Effect of Chromophore Charge on the Incorporation Efficiency of Fluorescence-Labeled
Nucleotides Catalyzed by Taq DNA Polymerase in Matrix Synthesis
V. E. Shershov, V. E. Kuznetsova, Yu. P. Lysov, T. O. Guseinov, V. E. Barsky, M. A. Spitsyn,
O. A. Zasedateleva, V. A. Vasiliskov, S. A. Surzhikov, A. S. Zasedatelev, and A. V. Chudinov p. 1013 abstract
The Differential Evolution Entirely Parallel Method for Model Adaptation in Systems Biology
K. N. Kozlov, A. M. Samsonov, and M. G. Samsonova p. 1016 abstract
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